ATC Abstracts

American Transplant Congress abstracts

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Articles tagged "Gene expression"

  • 2019 American Transplant Congress

    Integrative Analysis of Immune Repertoire and Gene Expression from RNA-seq in Kidney Organ Transplants

    S. Pineda1, A. Ravoor2, O. Bestard3, M. Sarwal1, M. Sirota2

    1Department of Surgery, UCSF, San Francisco, CA, 2BCHSI, UCSF, San Francisco, CA, 3Department of Surgery, 3Bellvitge University Hospital, Barcelona, Spain

    *Purpose: The main problem with kidney transplantation is the possibility of rejection, which is classified as either antibody-mediated rejection (AMR) or T-cell-mediated rejection (TCMR) depending…
  • 2019 American Transplant Congress

    Automated Histology Lesion Interpretation in Kidney Transplant Biopsies Shows That Pathologists Often Deviate from Banff Guidelines

    K. S. Madill-Thomsen1, J. Reeve2, G. Bohmig3, F. A. Eskandary4, A. Perkowska-Ptasinska5, M. Myslak6, P. F. Halloran and the INTERCOMEX Study Group1

    1University of Alberta, Edmonton AB, AB, Canada, 2Alberta Transplant Applied Genomics Centre, Edmonton, AB, Canada, 3Medical University of Vienna, Vienna, Austria, 4Medical University of Vienna, Edmonton AB, AB, Canada, 5Medical University of Warsaw, Warsaw, Poland, 6Pomeranian Medical University, Szczecin, Poland

    *Purpose: Histologic diagnosis of kidney transplant biopsies requires an expert pathologist using Banff guidelines to interpret features. Some problematic guidelines require experts to use professional…
  • 2019 American Transplant Congress

    Molecular Features of Rejection in Endobronchial Mucosa Biopsies

    M. D. Parkes, K. M. Halloran, J. Chang, P. F. Halloran and The INTERLUNG Study Group

    University of Alberta, Edmonton, AB, Canada

    *Purpose: Mucosal biopsies are safer and easier to collect than transbronchial biopsies (TBB) but cannot be assessed histologically for lung rejection. Reliable assessment would change…
  • 2019 American Transplant Congress

    Impact of Belatacept Conversion on Renal Function, Histology and Gene Expression in Kidney Transplant Patients with Interstitial Fibrosis and Tubular Atrophy

    G. Gupta1, D. Kumar1, M. Raynaud2, A. Loupy2, J. Chang3, J. Reeve3, P. Sanghi1, I. Yakubu1, L. Kamal1, M. Levy1, C. Bhati1, P. Kimball1, A. King1, H. Massey1, P. Halloran3

    1Virginia Commonwealth University, Richmond, VA, 2Paris Transplant Group, Paris, France, 3Alberta Transplant Genomics Applied Centre, Edmonton, AB, Canada

    *Purpose: Prior studies on the conversion of tacrolimus (Calcineurin Inhibitor; CNI) to belatacept have been limited in scope due to either the absence of, post-conversion…
  • 2019 American Transplant Congress

    Immunomics of Renal Allograft Acute T-Cell Mediated Rejection Biopsies of Tacrolimus- and Belatacept- Treated Patients

    M. van der Zwan1, C. C. Baan1, R. C. Colvin2, R. N. Smith2, R. A. White2, D. N. Ndishabandi2, A. L. Nigg1, T. P. van den Bosch1, G. N. de Graav1, M. C. Clahsen-van Groningen1, D. A. Hesselink1

    1Internal Medicine, Division Nephrology and Transplantation, Erasmus MC, Rotterdam, Netherlands, 2Pathology, Massachusetts General Hospital/Harvard Medical School, Boston, MA

    *Purpose: Belatacept-based therapy in kidney transplant recipient has been shown to increase long-term renal allograft and patient survival compared with calcineurin inhibitor based therapy, however…
  • 2019 American Transplant Congress

    Dosing Requirements Of Astagraf Xl In African American Kidney Transplant Recipients Converted From Twice-daily Tacrolimus (aaaktrs)

    J. N. Fleming, M. A. Posadas-Salas, D. J. Taber

    Medical University of South Carolina, Charleston, SC

    *Purpose: Pharmacokinetics from clinical studies demonstrated similar drug exposure (AUC) and correlation between trough (C0) and AUC between tacrolimus IR and Astagraf XL, which led…
  • 2019 American Transplant Congress

    The Molecular Features of Chronic Lung Allograft Dysfunction (CLAD) in Transbronchial and Endobronchial Mucosa Biopsies

    M. D. Parkes1, K. M. Halloran1, J. Chang2, P. F. Halloran and the INTERLUNG study group1

    1University of Alberta, Edmonton, AB, Canada, 2ATAGC, University of Alberta, Edmonton, AB, Canada

    *Purpose: Chronic lung allograft dysfunction (CLAD), the major long-term problem in lung transplantation, requires new strategies for prevention and management. However, CLAD is infrequently diagnosed…
  • 2019 American Transplant Congress

    Using Ensembles of Machine Learning Classifiers to Maximize the Accuracy and Stability of Molecular Biopsy Interpretation

    J. Reeve1, K. S. Madill-Thomsen2, P. F. Halloran and the INTERCOMEX Study Group3

    1University of Alberta, Edmonton, AB, Canada, 2Alberta Transplant Applied Genomics Centre, University of Alberta, Edmonton AB, AB, Canada, 3University of Alberta, Edmonton AB, AB, Canada

    *Purpose: The Molecular Microscope diagnostic system (MMDx), based on microarray gene expression, uses ensembles of machine learning classifiers rather than single genes, gene sets, or…
  • 2019 American Transplant Congress

    Single Cell RNA-seq Analysis of Antibody-Mediated Rejection Reveals Endothelial – Pericyte NOTCH Signaling

    A. F. Malone, A. Chadha, H. Wu, S. Ramakrishnan, E. Donnelly, B. D. Humphreys

    Washington University School of Medicine, Saint Louis, MO

    *Purpose: To precisely define endothelial cell responses in AMR we performed comprehensive single cell RNA-seq on a human kidney biopsy with AMR.*Methods: Single cell libraries…
  • 2019 American Transplant Congress

    Role of Mitochondria, Metabolism and Inflammation: Pathways Influencing Short Term Outcomes Post-Renal Transplantation

    S. Bontha1, A. Bajwa1, G. Lorenzo2, J. Eason3, D. Maluf4, V. Mas5

    1Surgery, UTHSC, Memphis, TN, 2Northwestern University, Chicago, IL, 3Director of Transplant Institute UTHSC, Memphis, TN, 4UTHSC, Memphis, TN, 5Director of Transplant Research Institute, Memphis, TN

    *Purpose: Preconditioning of donor kidneys and clinical assessment for need of dialysis early post-transplant vary per each case and are crucial for improving transplant outcomes.…
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