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Articles tagged "Gene expression"

  • 2022 American Transplant Congress

    Gene Expression Profiles of Peritubular Capillarits in Chronic Antibody-Mediated Rejection

    M. Eder1, M. Röbl1, H. Omic1, B. Adam2, D. Cejka3, N. Kozakowski4, D. D´Andrea5, M. Mengel2, Ž. Kikić5

    1Internal Medicine III, Nephrology and Dialysis, Medical University of Vienna, Vienna, Austria, 2Department of Laboratory Medicine and Pathology, University of Alberta, Edmonton, AB, Canada, 3Department of Medicine III, Nephrology, Hypertension, Transplantation and Rheumatology, Ordensklinikum Linz – Elisabethinen, Linz, Austria, 4Department of Pathology, Medical University of Vienna, Vienna, Austria, 5Department of Urology, Medical University of Vienna, Vienna, Austria

    *Purpose: Antibody-mediated rejection (ABMR) is one of the most significant contributors to late graft loss. Hallmark characteristics include peritubular capillaritis (ptc) and glomerulitis (g). Diffuse…
  • 2022 American Transplant Congress

    A Signature of Tolerance Which Identifies Subclinical Rejection-Free Patients at One Year After Kidney Transplantation

    R. Danger1, L. Le Berre1, M. Cadoux1, C. Kerleau1, P. Guérif1, E. Morelon2, O. Thaunat2, C. Legendre3, D. Anglicheau3, K. Renaudin1, M. Giral1, S. Brouard1

    1Centre de Recherche en Transplantation et Immunologie (CRTI), UMR 1064, ITUN, Nantes Université, CHU Nantes, Inserm, Nantes, France, 2Edouard Herriot Hospital, Hospices Civils de Lyon, Inserm U1111, Lyon-Est Medical Faculty, Claude Bernard University (Lyon 1), Lyon, France, 3APHP, Necker-Enfants Malades Institute, Inserm, Paris University, Paris, France

    *Purpose: Spontaneous and rare cases of patients undergoing a functional renal transplant in the absence of immunosuppression represent a particular situation of immune tolerance. We…
  • 2022 American Transplant Congress

    Technology-Driven Performance Improvement of a Biomarker Panel in Kidney Transplant: OmniGraf

    P. West-Thielke, C. Miller, N. Grund, A. Sutton, R. Sinha, M. Miller, S. Kleiboeker, J. Weems

    Eurofins, Framingham, MA

    *Purpose: Analyze the impact of the transition from TruGraf microarray to TruGraf PCR on the complementary performance characteristics of TruGraf plus TRAC (OmniGraf).*Methods: Development of…
  • 2022 American Transplant Congress

    Establishment And Validation Of A Predictive Model For Differential Rejection Diagnosis By Gene Expression Profiling (GEP) In Renal Allograft Biopsies Using Banff Human Organ Transplant (B-HOT) Gene Panel

    H. Zhang1, R. Haun2, F. Collin1, C. Cassol2, S. Coley2, J. Wilson2, S. Stone1, K. Qu1, W. Tian1, N. Agrawal1, G. Shekhtman1, C. Larsen2

    1CareDx, Inc., Brisbane, CA, 2Arkana Laboratories, Little Rock, AR

    *Purpose: Large scale GEP studies evaluating the performance of Banff-endorsed B-HOT gene panel for allograft rejection diagnosis have not been published. In this study, we…
  • 2022 American Transplant Congress

    Protein and Transcriptomic Differences Between High and Low Neointimal Arteries in Human Cardiac Allograft Vasculopathy Rejected Grafts

    J. Nevarez-Mejia1, H. C. Pickering1, R. A. Sosa1, R. P. Lau1, G. A. Fishbein1, W. M. Baldwin III2, R. L. Fairchild2, E. F. Reed1

    1University of California, Los Angeles, Los Angeles, CA, 2Cleveland Clinic Main Campus, Lerner Research Institute, Cleveland, OH

    *Purpose: Cardiac allograft vasculopathy (CAV) is the leading cause of graft failure and mortality following heart transplantation. Donor specific antibodies (DSA) contribute to CAV progression…
  • 2022 American Transplant Congress

    Crosstalk Between micro-RNAs, mRNAs, and Long Non-Coding RNAs in Human Hepatic Ischemia Reperfusion Injury

    C. Kuscu1, S. Naik1, C. Eymard2, A. Bajwa1, D. Maluf3, V. Mas3, J. Eason4, C. Kuscu1

    1Transplant Research Institute, James D. Eason Transplant Institute, Department of Surgery, The University of Tennessee Health Science Center, Memphis, TN, 2James D. Eason Transplant Institute, Department of Surgery, The University of Tennessee Health Science Center, Memphis, TN, 3Surgery, University of Maryland, Baltimore, MD, 4University of Tennessee/Methodist Transplant Institute, Memphis, TN

    *Purpose: Present study utilizes multiple omics tools and clinical samples with a system biology approach characterizing mRNAs, long non-coding RNAs (lncRNAs) and small non-coding RNAs…
  • 2022 American Transplant Congress

    Evaluating Long Term Outcomes in Kidney Transplant Patients with TruGraf Gene Expression and TRAC Dd-cfdna in the TRULO Study

    P. West-Thielke, W. Ally, J. Hickey, L. Stach, J. Fleming, T. Cober, A. Kawano, I. Agboli, C. Miller, J. Holman

    Eurofins Transplant Genomics, Framingham, MA

    *Purpose: The aim of this study is to evaluate long term clinical outcomes in kidney transplant patients undergoing non-invasive rejection monitoring with the OmniGraf® biomarker…
  • 2021 American Transplant Congress

    VP2 MRNA Distinguishes the Direct Injury and Inflammation Effects of Polyoma Virus (BK) Infection from the Cognate TCMR Response That Follows Immunosuppressive Minimization

    P. F. Halloran1, K. Famulski1, K. S. Madill-Thomsen1, G. Böhmig2, G. Gupta3, M. Myślak4, O. Viklicky5, &. the INTERCOMEX Study Group6

    1Alberta Transplant Applied Genomics Centre, Edmonton, AB, Canada, 2Medical University of Vienna, Vienna, Austria, 3Virginia Commonwealth University, Richmond, VA, 4Pomeranian Medical University, Szczecin, Poland, 5Institute for Clinical and Experimental Medicine, Prague, Czech Republic, 6., Edmonton, AB, Canada

    *Purpose: BK virus nephropathy (BKN) and T cell-mediated rejection (TCMR) are difficult to distinguish by histology but often coexist due to the necessity for immunosuppression…
  • 2021 American Transplant Congress

    RNA Sequencing (RNAseq) Tissue Analysis Can Provide Early Warning Signals for Potential Intestinal Transplant Complications

    J. Kang1, L. Belyayev1, O. Aguirre1, K. Khan1, Y. Gusev2, K. Bhuvaneshwar2, H. Ressom3, J. Hawksworth1, C. Matsumoto1, T. Fishbein1, A. Kroemer1

    1MedStar Georgetown Transplant Institute, Washington, DC, 2Georgetown University Medical Center, Innovation Center for Biomedical Informatics, Washington, DC, 3Georgetown University Medical Center, Lombardi Comprehensive Cancer Center, Washington, DC

    *Purpose: A disrupted mucosal barrier in intestinal grafts can cause alloreactive complications such as rejection, inflammation and infection following intestinal transplantation (ITx). We hypothesize that…
  • 2021 American Transplant Congress

    Transcriptomics and Proteomics Profiling of Complement Pathway (cp) Proteins in Biopsies With Polyomavirus Bk Nephropathy (bkvn)

    P. Randhawa1, F. Fei2, Y. Huang1, G. Tseng3, K. Xiao4

    1Departments of Pathology, Pittsburgh, PA, 2Pharmacology and Chemical Biology, Pittsburgh, PA, 3Biostatistics, Pittsburgh, PA, 4Pharmacology and Chemical Biology, University of Pittsburgh, Pittsburgh, PA

    *Purpose: Late stage BKVN can show C4d as well as classic immune complex deposits in the tubular basement membranes (Bracamonte et al. Am J Transplant…
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