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Plasma Levels of Donor-Derived Cell-Free DNA Increase With Rejection and Often Decrease After Treatment in Organ Transplant Recipients

M. Grskovic,1 J. Beausang,1 D. Hiller,1 R. Sit,1 B. Christie,1 J. Elechko,1 R. Woodward,1 J. Yee,1 J. Kobashigawa.2

1CareDx, Inc, Brisbane, CA
2Cedars-Sinai Medical Center, Los Angeles, CA.

Meeting: 2015 American Transplant Congress

Abstract number: 153

Keywords: Genomic markers, Heart transplant patients

Session Information

Session Name: Plenary Session II

Session Type: Plenary

Date: Monday, May 4, 2015

Session Time: 8:30am-9:30am

 Presentation Time: 8:30am-8:45am

Location: Terrace Ballroom 1, 2, 3

Purpose: Donor-derived cell-free DNA (dd-cfDNA) is a potential biomarker of acute cellular rejection (ACR) in organ transplant recipients. dd-cfDNA levels in longitudinal plasma samples from heart transplant recipients with a biopsy-confirmed ACR were compared to plasma levels of dd-cfDNA in non-ACR heart transplant recipients.

Methods: 63 patients (pts) from the CARGO II trial provided 205 plasma samples. For 180 samples, biopsies were conducted and graded by ≤4 independent pathologists. 28 samples assigned a biopsy grade of 2R or 3R, by ≥2 pathologists, were classified as rejection (R). 27 samples assigned a biopsy grade of 0R by 4 pathologists were classified as non-rejection (NR). Samples from up to two prior visits before R and NR events, and up to three visits after R events comprised the remaining 150 samples. cfDNA purified from plasma was sequenced to quantify dd-cfDNA levels. Standard statistical measures of correlation and significance were used.

Results: dd-cfDNA levels were significantly higher (p=0.017) in pts with biopsy-confirmed ACR (R, mean 1.7%) compared to stable pts (NR, mean 0.99%). An ROC curve yielded the AUC of 0.68 (95% CI 0.56-0.80). We analyzed 16 cases with biopsy-confirmed ACR and 2 serial samples preceding ACR, and found that in 10 cases levels of dd-cfDNA were elevated as early as 25 days prior to ACR. In 17 cases with clinically treated biopsy-confirmed ACR and 2 serial samples following the ACR, trends were observed where pts with an improved biopsy grade following treatment often experienced the largest decrease (>2 fold) in dd-cfDNA. Pts with smaller changes (<2 fold) in dd-cfDNA often experienced a grade 1R ACR within 30 days of treatment, suggesting that the initial treatment may have been insufficient.

Conclusion: dd-cfDNA is a useful biomarker of ACR and a quantitative indicator of organ health. Preliminary data suggest that levels of dd-cfDNA increase at the time of ACR and decrease when the rejection resolves, but may stay elevated or increase if rejection persists. This non-invasive test may aid in the long-term monitoring of allograft health and identification of patients with ACR, thereby helping ascertain clinical response to rejection treatment without the need for follow-up biopsy.

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To cite this abstract in AMA style:

Grskovic M, Beausang J, Hiller D, Sit R, Christie B, Elechko J, Woodward R, Yee J, Kobashigawa J. Plasma Levels of Donor-Derived Cell-Free DNA Increase With Rejection and Often Decrease After Treatment in Organ Transplant Recipients [abstract]. Am J Transplant. 2015; 15 (suppl 3). https://atcmeetingabstracts.com/abstract/plasma-levels-of-donor-derived-cell-free-dna-increase-with-rejection-and-often-decrease-after-treatment-in-organ-transplant-recipients/. Accessed May 19, 2025.

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