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A Novel Peripheral Blood mRNA Biomarker Predicts Subclinical Rejection and Kidney Transplant Outcomes

J. Friedewald,1 S. Kurian,2 T. Whisenant,2 R. Heilman,3 E. Poggio,4 C. Marsh,2 P. Baliga,5 N. Bridges,6 J. Odim,6 M. Brown,6 D. Ikle,7 B. Armstrong,7 J. Charette,1 S. Brietigam,1 N. Sustento-Reodica,1 L. Zhao,1 M. Kandpal,1 D. Salomon,2 M. Abecassis.1

1Northwestern Medicine, Chicago
2Scripps, La Jolla
3Mayo AZ, Scottsdale
4Cleveland Clinic, Cleveland
5MUSC, Charleston
6NIAID, Bethesda
7Rho, Chapel Hill.

Meeting: 2018 American Transplant Congress

Abstract number: 497

Keywords: Genomic markers, Kidney transplantation, Outcome, Rejection

Session Information

Session Name: Concurrent Session: Biomarkers, Immune Monitoring and Outcomes: Clinical

Session Type: Concurrent Session

Date: Tuesday, June 5, 2018

Session Time: 4:30pm-6:00pm

 Presentation Time: 5:06pm-5:18pm

Location: Room 602/603/604

BACKGROUND

Sub-clinical acute rejection (subAR) in kidney transplant recipients (KTR), defined as histological rejection on surveillance biopsy (Bx) in a patient with stable renal function, signals under-immunosuppression (IS) and can lead to chronic rejection and graft loss. Surveillance Bx are invasive and are not performed routinely in all centers. Non-invasive biomarkers are needed to detect rejection in KTR with stable renal function.

METHODS

KTR were enrolled into a multi-center 24-month observational study at 5 US transplant centers that used routine surveillance Bx as standard of care at 2-6, 12 and 24 months. Precise clinical phenotypes (PCP) were used to define subAR. Differential gene expression (DGE) from peripheral blood samples, all paired with surveillance biopsies, were used to train a Random Forests (RF) model to develop a gene expression profile (GEP) for subAR. A separate cohort of paired samples with prevalent incidence of subAR was used to validate the GEP. A clinical 24-month composite endpoint (CCE: Grade 2+ IFTA, BPAR, [Delta]eGFR >10cc/min) was used to assess clinical validity for both the PCP and the GEP.

RESULTS

DGE from 530 paired samples (130 subAR; 80% borderline) collected from 250 KTR with a prevalent incidence of subAR yielded a RF model: AUC 0.85; 0.84 after internal validation with bootstrap resampling. We selected a predicted probability threshold favoring specificity and NPV (87% and 88%) over sensitivity and PPV (64% and 61%), respectively. We tested the locked model/threshold on a separate cohort of 138 KTR undergoing surveillance Bx at our institution (NPV 78%; PPV 51%). Based on the CCE, both the PCP (p<0.001) and GEP (p=0.009) of subAR within the first 12 months following transplant were independently associated with worse graft outcomes, compared to non-rejection controls.

CONCLUSIONS

A novel, validated peripheral blood molecular biomarker for the detection of subAR demonstrates clinical validity, setting the stage for biomarker-informed IS management that can complement current practice, potentially leading to improved outcomes following kidney transplantation.

CITATION INFORMATION: Friedewald J., Kurian S., Whisenant T., Heilman R., Poggio E., Marsh C., Baliga P., Bridges N., Odim J., Brown M., Ikle D., Armstrong B., Charette J., Brietigam S., Sustento-Reodica N., Zhao L., Kandpal M., Salomon D., Abecassis M. A Novel Peripheral Blood mRNA Biomarker Predicts Subclinical Rejection and Kidney Transplant Outcomes Am J Transplant. 2017;17 (suppl 3).

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To cite this abstract in AMA style:

Friedewald J, Kurian S, Whisenant T, Heilman R, Poggio E, Marsh C, Baliga P, Bridges N, Odim J, Brown M, Ikle D, Armstrong B, Charette J, Brietigam S, Sustento-Reodica N, Zhao L, Kandpal M, Salomon D, Abecassis M. A Novel Peripheral Blood mRNA Biomarker Predicts Subclinical Rejection and Kidney Transplant Outcomes [abstract]. https://atcmeetingabstracts.com/abstract/a-novel-peripheral-blood-mrna-biomarker-predicts-subclinical-rejection-and-kidney-transplant-outcomes/. Accessed May 16, 2025.

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