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Machine Learning to Assess Kidney Donor Risk

A. Shah, M. Li, Z. Chen.

Thomas Jefferson University, Philadelphia, PA.

Meeting: 2018 American Transplant Congress

Abstract number: C46

Keywords: Kidney transplantation, Outcome

Session Information

Session Name: Poster Session C: Kidney Donor Selection / Management Issues

Session Type: Poster Session

Date: Monday, June 4, 2018

Session Time: 6:00pm-7:00pm

 Presentation Time: 6:00pm-7:00pm

Location: Hall 4EF

Organ quality estimation is critical in allocation and organ acceptance in renal transplantation. Standard methods determine the likelihood of an outcome of interest utilizing Cox regression or logistical regression models. The standard measure of organ quality is kidney donor risk index (KDRI). A nomogram for predicting delayed graft function also exists. Both models suffer from a poor c-statistic limiting their usefulness in clinical practice.

The OPTN database was reviewed and outcomes were supplemented utilizing the USRDS database. 149,052 primary kidney transplants were identified. Primary endpoints included death and death censored graft failure. Secondary endpoint was delayed graft function as defined as requiring dialysis during the first two weeks post-transplant. Input data were divided into recipient (REC), donor (DON), other pre-transplant (PRE) and transplant (TRAN) variable categories. Models were trained using 80% of the sample and tested on the remaining 20%. Machine learning estimations of organ quality was compared to KDRI on five outcome metrics. Two machine learning techniques were utilized: XGBoost and neural network. XGBoost method showed improved c-statistics relative to KDRI in all outcome measures.

Table 1. Model Performance Comparison: Holdout Sample C-statistics

The full XGBoost model was analyzed for positive predictive value and sensitivity.

Table 2. Model Performance Comparison: PPV and Sensitivity

Outcome Holdout Sample # Event # Incidence PPV Sensitivity
Delay Graft Function 29,811 7,623 25.6% 43.1% 69.5%
One-year Mortality 27,044 1,233 4.5% 9.2% 63.0%
Return to Dialysis in One Year 27,024 1,203 4.5% 8.2% 64.1%
Five-year Mortality 18,283 3.096 16.9% 29.6% 70.8%
Return to Dialysis in Five Year 17,392 2,205 12.7% 21.9% 63.9%

Machine learning algorithms demonstrated improvement in predictive accuracy in all post transplant measures relative to current standards. Further algorithm refinement and development is necessary to improve these results for clinical use.

CITATION INFORMATION: Shah A., Li M., Chen Z. Machine Learning to Assess Kidney Donor Risk Am J Transplant. 2017;17 (suppl 3).

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To cite this abstract in AMA style:

Shah A, Li M, Chen Z. Machine Learning to Assess Kidney Donor Risk [abstract]. https://atcmeetingabstracts.com/abstract/machine-learning-to-assess-kidney-donor-risk/. Accessed May 9, 2025.

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